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Plan#

Listed in order of priority

  • snakemake workflow for ATNx study completed
  • no coding for SIMURAN until proper UML, JASP style statement of need etc.
  • integrate past work into thesis and clean up Github projects.
  • SIMURAN coding and open data analysis.
  • Finalise CLA work and LFP work in my thesis.
  • Finalise software section in my thesis.
  • Finalise open data analysis in my thesis.
  • Finalise (possible) thesis section on workflow management and ML primer style (maybe in software section)

Daily tasks needed#

  1. Upload data to OSF for CLA.
  2. Download all CI data from Allen.
  3. Download ephys data from Allen.
  4. Thesis writing.